WebMay 19, 2024 · I am currently annotating a non-reference species genome, and I am applying RepeatModeler and RepeatMasker. I installed them with miniconda (BioBuilds). I run RepeatModeler, which did not yield me a classified uotput, so I tried to do it by running. RepeatClassifier -consensi consensi.fa. However, I got the following error: WebLab7 Systems also curates, maintains, and supports BioBuilds, a collection of open-source bioinformatics tools, pre-built for Linux* on both x86 and IBM Power Systems* platforms and for OS X*. By including all supporting libraries, BioBuilds eliminates the need to maintain and build custom versions of these tools―
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WebAug 22, 2024 · I tried to find the deps in conda channels and the problem probably are SignalP and TMHMM. Ok, I have created a conda env and an installation script, which installs the dependencies in a given local directory, which I am using in a Snakemake workflow. After polishing it a bit, I will share it. Created a git repo with the helper scripts. fit excel in word
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